never in taxon
PMID:17921072
tooth SubClassOf 'never in taxon' value 'Aves'
?X DisjointWith RO_0002162 some ?Y
Chris Mungall
PMID:20973947
x never in taxon T if and only if T is a class, and x does not instantiate the class expression "in taxon some T". Note that this is a shortcut relation, and should be used as a hasValue restriction in OWL.
shorthand
imported from
part of
part_of
has part
has_part
inheres in
inheres_in
inheres_in
is bearer of
bearer of
bearer_of
participates in
participates_in
participates_in
connected to
David Osumi-Sutherland
X connected_to Y if and only if X and Y share a fiat boundary.
has component
For use in recording has_part with a cardinality constraint.
develops from
Chris Mungall
Melissa Haendel
David Osumi-Sutherland
Terry Meehan
This is the transitive form of the develops from relation
x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y
entity
continuant
occurrent
An entity that has temporal parts and that happens, unfolds or develops through time. Sometimes also called perdurants.
a surgical operation as processual context for a nosocomical infection
occurrent
perdurant
the life of an organism
the most interesting part of Van Gogh's life
the spatiotemporal context occupied by a process of cellular meiosis
the spatiotemporal region occupied by the development of a cancer tumor
independent continuant
process
A processual entity that is a maximally connected spatiotemporal whole and has bona fide beginnings and endings corresponding to real discontinuities.
process
the life of an organism
the process of cell-division
the process of sleeping
material entity
anatomical structure
material anatomical entity
cell component
multi-cell-component structure
neuron projection bundle
multicellular anatomical structure
cell
neuron
habitat
A spatial region having environmental qualities which may sustain an organism or a community of organisms.
membrane
axon
dendrite
presynaptic membrane
cell projection
neuron projection
synapse part
cell part
synapse
postsynaptic membrane
Acanthocharax microlepis
5366
Cynopotamus kincaidi
17121
Small bony process extending from the anteroventral portion of the laterosensory canal in the second infraorbital interlocking the dorsal border of first infraorbital and the ventral border of second infraorbital
Small bony process extending from the anteroventral portion of the laterosensory canal in the second infraorbital interlocking the dorsal border of first infraorbital and the ventral border of second infraorbital: 1. absent 2. present
absent
Gnathocharax steindachneri
11459
15311
present
Bony expansion from anteroventral part of second infraorbital Iaterosensory canal
Bony expansion from anteroventral part of second infraorbital Iaterosensory canal: 1. absent 2. covering the dorsal median border of first infraorbital 3. covering the posterior part of first infraorbital
absent
Heterocharax macrolepis
11457
covering the dorsal median border of first infraorbital
Hoplocharax
Specimen not in materials list (WD 9/8/2008)
covering the posterior part of first infraorbital
Lonchogenys ilisha
11460
Ventral border of second infraorbital
Ventral border of second infraorbital : 1. straight or slightly convex 2. conspicuously sinuous
straight or slightly convex
Lignobrycon myersi
16135
conspicuously sinuous
Posteroventral border of second infraorbital
Posteroventral border of second infraorbital: 1. smooth 2. crenulate
Roeboides sp. A
Corrected student entry for single Roeboides sp.; incorrect TTO request submitted 21 July 2008 (WD) for Roeboides sp.; New TTO request for "Roeboides sp. A (Lucena and Menezes 1998)" submitted. JE 20May2009
34709
smooth
crenulate
Roeboides sp. B
Corrected student entry for single Roeboides sp.; incorrect TTO request submitted 21 July 2008 (WD) for Roeboides sp.; New TTO request submitted for "Roeboides sp. B (Lucena and Menezes 1998)". 20May2009 (JE)
uncat.
Anterodorsal portion of third infraorbital and anteroventral portion of fourth infraorbital
Anterodorsal portion of third infraorbital and anteroventral portion of fourth infraorbital: 1. internally in contact only 2. internally interdigitated
internally in contact only
internally interdigitated
Triportheus guentheri
16710
Anterodorsal portion of fourth infraorbital and anteroventral portion of fifth infraorbital
Anterodorsal portion of fourth infraorbital and anteroventral portion of fifth infraorbital: 1. internally in contact only 2. internally interdigitated
internally in contact only
Triportheus nematurus
10756
internally interdigitated
Groove on medial face of premaxilla
Groove on medial face of premaxilla: 1. not extending beyond base of first premaxillary tooth 2. extending beyond base of first premaxillary tooth
not extending beyond base of first premaxillary tooth
Agoniates anchovia
16969
Acestrorhynchus pantaneiro
16187
9443
12404
extending beyond base of first premaxillary tooth
Cynodon gibbus
16970
Lateral surface of distal end of maxilla
Lateral surface of distal end of maxilla: 1. smooth 2. rugose
smooth
Rhaphiodon vulpinus
10209
16949
13253
rugose
Maxillary canal
Maxillary canal: 1. not branched 2. with three or four branches 3. subdivided into four to nine branches
not branched
Gilbertolus atratoensis
25882
10663
with three or four branches
subdivided into four to nine branches
Gilbertolus maracaiboensis
121387
First three teeth on the lower jaw
First three teeth on the lower jaw: 1. not arranged as in 1 2. increasing in size from the symphysis, the third larger than the other two
not arranged as in 1
increasing in size from the symphysis, the third larger than the other two
Roestes molossus
35556
Bony projection from the anterorventral region of orbitosphenoid
Bony projection from the anterorventral region of orbitosphenoid: 1. absent 2. present and extending under rhinosphenoid
absent
Roestes ogilviei
9704
17124
present and extending under rhinosphenoid
Roestes sp.
10269
Concavity on posteroventral region of orbitosphenoid
Concavity on posteroventral region of orbitosphenoid: 1. absent 2. very conspicuous 3. moderate
absent
very conspicuous
Brycon pesu
17092
moderate
Chalceus macrolepidotus
14244
Ventral border of rhinosphenoid
Ventral border of rhinosphenoid: 1. aligned with or below ventral border of orbitosphenoid 2. well above ventral border of orbitosphenoid
aligned with or below ventral border of orbitosphenoid
well above ventral border of orbitosphenoid
Astyanax
Specimen not in materials list (WD 9/8/2008)
Galeocharax humeralis
122676
Posterodorsal region of rhinosphenoid
Posterodorsal region of rhinosphenoid: 1. absent or if present distinct from the condition of state 1 [state 1 is: with a long, thin and dorsally turned process] 2. with a long, thin and dorsally turned process
absent or if present distinct from the condition of state 1 [state 1 is: with a long, thin and dorsally turned process]
Galeocharax kneri
17083
Thorachocharax stellatus
16900
with a long, thin and dorsally turned process
Accessory branch of laterosensory canal on second infrapharyngobranchial
Accessory branch of laterosensory canal on second infrapharyngobranchial: 1. absent 2. present
absent
Mesocoracoid
Mesocoracoid: 1. short 2. long almost reaching dorsomedial portion of cleithrum
short
long almost reaching dorsomedial portion of cleithrum
Tip of mesocoracoid
Tip of mesocoracoid: 1. straight 2. curved
straight
curved
Bony ridge on internal surface of cleithrum
Bony ridge on internal surface of cleithrum: 1. absent 2. present
absent
present
Large extension of mesocoracoid attached to cleithrum
Large extension of mesocoracoid attached to cleithrum: 1. absent 2. present
absent
present
Mesopterygoid teeth
Mesopterygoid teeth: 1. absent 2. present
absent
Brycon sp.
15237
present
present
Teeth on laminar extension from dorsolateral border of ectopterygoid
Teeth on laminar extension from dorsolateral border of ectopterygoid: 1. absent 2. present
absent
present
Metapterygoid-quadrate fenestra
Metapterygoid-quadrate fenestra: 1. round or horizontally oblong 2. vertically oblong
round or horizontally oblong
vertically oblong
Coracoid foramen
Coracoid foramen: 1. absent or small 2. developed 3. conspicuously large
absent or small
developed
conspicuously large
Bony bridge formed by dorsolateral extension of coracoid and median blade from cleithrum
Bony bridge formed by dorsolateral extension of coracoid and median blade from cleithrum: 1. paraIlel with median horizontal plan of body 2. inclined at angle of nearly 45 degrees in relation to median honzontal plan of body
Laterosensory canal on premaxilla
Laterosensory canal on premaxilla: 1. absent 2. present
paraIlel with median horizontal plan of body
inclined at angle of nearly 45 degrees in relation to median honzontal plan of body
absent
Scapular foramen
Scapular foramen: 1. obliterated by cleithrum 2. totally exposed
obliterated by cleithrum
totally exposed
Postcleithrum 2
Postcleithrum 2: 1. present 2. absent
present
absent
Bryconamericus iheringi
11213
11466
Postcleithrum 3
Postcleithrum 3: 1. present 2. absent
present
absent
Bony crest on lateral surface of second branchiostegal ray
Bony crest on lateral surface of second branchiostegal ray: 1. absent 2. present
absent
present
Number of branchiostegal rays
Number of branchiostegal rays: 1. four 2. five
four
present
five
Number of branchiostegal rays on posterior ceratohyal
Number of branchiostegal rays on posterior ceratohyal: 1. one 2. two
one
two
Gill rakers of first gill arch
Gill rakers of first gill arch: 1. long and slender 2. short, flat and covered with sharp spines
long and slender
short, flat and covered with sharp spines
Teeth on basibranchial 4
Teeth on basibranchial 4 : 1. absent 2. present
absent
present
Anterior end of basibranchial 3
Anterior end of basibranchial 3: 1. smooth 2. with short bony projections
Participation of anteroventral portion of second infraorbital on outer margin of circumorbital ring
Participation of anteroventral portion of second infraorbital on outer margin of circumorbital ring: 1. full 2. only partial
smooth
with short bony projections
Chalceus erythrurus
17125
full
Anterior intermuscular bones
Anterior intermuscular bones: 1. absent 2. present
absent
present
Origin of pectoral fin
Origin of pectoral fin: 1. anterior to vertical line tangential to posteriorrnost border of cleithrum 2. well posterior to vertical line tangential to posteriormost border of cleithrum
anterior to vertical line tangential to posteriorrnost border of cleithrum
well posterior to vertical line tangential to posteriormost border of cleithrum
Dark spot anterior to base of first dorsal fin ray
Dark spot anterior to base of first dorsal fin ray: 1. absent 2. present
absent
present
Space between hypurals 2 and 3
Space between hypurals 2 and 3: 1. present 2. absent
present
absent
Lateral processes on pleural ribs
Lateral processes on pleural ribs: 1. absent 2. short 3. long and subdivided
absent
only partial
short
long and subdivided
"Accessory" abductor muscle
"Accessory" abductor muscle: 1. absent 2. present
absent
present
Abductor superficialis muscle
Abductor superficialis muscle: 1. absent or if present restricted to small area in anterior of coracoid foramen 2. well developed on medial part of pectoral girdle
absent or if present restricted to small area in anterior of coracoid foramen
well developed on medial part of pectoral girdle
Charax gibbosus
10116
Sternohyoideus muscle
Sternohyoideus muscle: 1. separated from abductor superficialis by the cleithrum 2. not separated from abductor superficialis by the cleithrum
separated from abductor superficialis by the cleithrum
not separated from abductor superficialis by the cleithrum
Sections A2a and A2b of the adductor mandibulae
Sections A2a and A2b of the adductor mandibulae: 1. not divided by levator arcus palatini 2. divided by levator arcus palatini
not divided by levator arcus palatini
First infraorbital
First infraorbital: 1. short 2. very long and narrow
divided by levator arcus palatini
short
A1 section of adductor mandibulae
A1 section of adductor mandibulae: 1. large and broadly originating from horizontal process of quadrate 2. greatly reduced and narrowly originating from horizontal process of quadrate
large and broadly originating from horizontal process of quadrate
greatly reduced and narrowly originating from horizontal process of quadrate
Lateral process of centrum 2
Lateral process of centrum 2: 1. short and extending laterally and slightly anteriorly 2. strongly developed and dorsally turned
short and extending laterally and slightly anteriorly
strongly developed and dorsally turned
very long and narrow
Charax stenopterus
9285
Ventral border of first infraorbital
Ventral border of first infraorbital: 1. covering a very small anterodorsal portion of the maxilla 2. covering most of the maxilla
covering a very small anterodorsal portion of the maxilla
Cynopotamus argenteus
11854
covering most of the maxilla